In this episode of the Bioinformatics Lab Podcast, Zachary Konkel shares his journey from studying chemistry to specializing in mycology and bioinformatics. He discusses the significance of fungi in medicine, particularly in producing antimicrobial compounds, and the challenges faced in fungal genomics. Zach highlights the development of mycotools (https://github.com/xonq/mycotools) as a solution for analyzing fungal genomes and the importance of phylogenetics in understanding fungal pathogens like Candida auris.
The conversation also touches on the growing concern of antifungal resistance and the potential for next-generation sequencing to improve outbreak detection. Finally, Zach shares his passion for mushroom foraging, connecting his scientific interests with personal hobbies.
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In this episode of the Bioinformatics Lab Podcast, Zachary Konkel shares his journey from studying chemistry to specializing in mycology and bioinformatics. He discusses the significance of fungi in medicine, particularly in producing antimicrobial compounds, and the challenges faced in fungal genomics. Zach highlights the development of mycotools (https://github.com/xonq/mycotools) as a solution for analyzing fungal genomes and the importance of phylogenetics in understanding fungal pathogens like Candida auris.
The conversation also touches on the growing concern of antifungal resistance and the potential for next-generation sequencing to improve outbreak detection. Finally, Zach shares his passion for mushroom foraging, connecting his scientific interests with personal hobbies.
EP 62: Public Health Pathogen Genomics in Africa with James Otieno
the bioinformatics lab
1 hour 1 second
1 month ago
EP 62: Public Health Pathogen Genomics in Africa with James Otieno
Summary
In this episode of the Bioinformatics Lab podcast, James Oteno shares his journey as a bioinformatician and genomic epidemiologist, discussing the intersection of bioinformatics and public health, particularly in the context of emerging pathogens in Africa. The conversation covers the importance of both wet lab and dry lab skills, the role of KEMRI in global health, and the impact of COVID-19 on public health practices. Oteno also delves into the MPOX outbreak, the rapid sequencing technology used in Ebola outbreaks, and the future of genomic epidemiology in Africa, emphasizing the need for collaborative networks and equitable partnerships in global health efforts.
the bioinformatics lab
In this episode of the Bioinformatics Lab Podcast, Zachary Konkel shares his journey from studying chemistry to specializing in mycology and bioinformatics. He discusses the significance of fungi in medicine, particularly in producing antimicrobial compounds, and the challenges faced in fungal genomics. Zach highlights the development of mycotools (https://github.com/xonq/mycotools) as a solution for analyzing fungal genomes and the importance of phylogenetics in understanding fungal pathogens like Candida auris.
The conversation also touches on the growing concern of antifungal resistance and the potential for next-generation sequencing to improve outbreak detection. Finally, Zach shares his passion for mushroom foraging, connecting his scientific interests with personal hobbies.
