Spinnin' bases on wafers to do mostly natural SBS
Chapters:
- 00:00 Ultima ePCR with beads
- 07:10 Spinning the wafer, nucleotides, no blocking
- 14:30 Ultima ppmSeq + Element UltraQ
- 25:30 How Element UltraQ was born
- 30:30 snakemake, cromwell, nextflow
- 36:50 ncRNA
Ultimas homepage: https://www.ultimagenomics.com/
Nature paper with the chemistry: https://www.nature.com/articles/s41587-022-01452-6
Elements UltraQ chemistry:
Snakemake: https://snakemake.readthedocs.io/en/stable/
Nextflow: https://www.nextflow.io/docs/latest/index.html
Cromwell: https://cromwell.readthedocs.io/en/stable/
Small overview of not all ncRNA types: https://microbenotes.com/types-of-rna/
Since 2018, West German Genome Center (https://wggc.de/) operates as the next generation sequencing facility and supports research in genomics & transcriptomics by providing expertise and sequencing services. WGGC is a part of the Next Generation Sequencing Competence Network (NGS-CN: https://ngs-kn.de/) – network of NGS core facilities in Germany. Listen to our podcast and we're happy to receive your feedback&questions via Email (podcast[dot]explain[at]gmail[dot]com ).
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Attribution:
Podcast Title: Explain Podcast
Creators: Iuliia Novoselova, Daniel Rickert
